Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSLIEKQIVNKEIRVTDPLFEVIHQIQAENEEPLAALNTGYHE-PADIRKRLENIISDKVDDTVTVLLPFYTDFGKHISIGKNVFINRQVMFVDLGGICLEDSVLIGPRVNLITVNHLTDPKER--RGLSVKPIHIKKNAWIGAGATILPGVTIGENAIVAANATVTKDVPDNTIVAGIPAKIVKPVERII
1OCX Chain:A ((2-182))--TEKEKMIAGELYRSADET---LSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQ-V-TEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKKL----


General information:
TITO was launched using:
RESULT:

Template: 1OCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 936 -39746 -42.46 -223.29
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -42.46
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.676

(partial model without unconserved sides chains):
PDB file : Tito_1OCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OCX-query.scw
PDB file : Tito_Scwrl_1OCX.pdb: