Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAWQNVEVVHVVAMDKNHCIGKGNALPWHISADLKHFKEITQGGVVIMGRKTLESMGRALPNRVNWVITRDINWHFDGVKIAYSIEDALNAALEDAKNTEKQALFIIGGGEIFKQTLSIADRLELTHVDLDVQGDAHYPTIP-SEFHKTASEQQVD---EKSGTSFEFATYKK
3S9U Chain:A ((2-163))---HHMRVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYHVEGCEVAHSVEEVFELCK------NEEEIFIFGGAQIYDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVE--KGLTDEKNPYTYYYHVYEK


General information:
TITO was launched using:
RESULT:

Template: 3S9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 734 -95889 -130.64 -606.89
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -130.64
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.642

(partial model without unconserved sides chains):
PDB file : Tito_3S9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3S9U-query.scw
PDB file : Tito_Scwrl_3S9U.pdb: