Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEAYIIDAIRTPRGKGKKDGSLYEVKPITLLTTLLNELQQRHQLDTSKVDDIVLGCVTPIGDQGGDIAKTAAIAAGWNDDVAGVQINRFCASGLEAVNMAAMKVRSGWEDLVVAGGVESMSRIPMGSDG-------G-PWA---------LDPETNLKSSFVPQGVGADLIATLDGYSREDVDNFAVKSQQKAAAAQANGYFDQSVVPVKDHAGVV--ILEKDEFIKGNTTLEGLAKLNPSFEMMGQMGFDAIALQKYPEAQKVNHVHHAGNSSGIVDGAALVLLASEKAVKEQNLKPRAKVLATALVGTDPTIMLTGPAPAARKALEKAGLTIDDIDLFEVNEAFAAVVMRFINELNV--PAEKVNVNGGAIALGHPLGATGAMILGTLLDELERQNKKRGLATLCVGGGMGIATIIERV
1ULQ Chain:G ((2-399))-PEAWIVEAVRTPIGKHG-G-ALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREG---GT-----------------VTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVEG-


General information:
TITO was launched using:
RESULT:

Template: 1ULQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 2291 -11942 -5.21 -31.68
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain G : 0.77

3D Compatibility (PKB) : -5.21
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_1ULQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ULQ-query.scw
PDB file : Tito_Scwrl_1ULQ.pdb: