Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWYNRAMKHFDTIVIGGGPAGMMATISSSFYGQKTLLIEKNRKLGKKLAGTGGGRCNVTNNGSLDNLLAGIPG-NGRFLYSVFSQFDNHDIINFFTENGVKLKVEDHGRVFPASDKSRTIIEALEKKITELGGQVATQIEIVSVKKVDDQFVLKSADQTFTCEKLIVTTGGKSYPSTGSTGFGHEIARHFKHTITDLEAAESPLLTDF-PH---KALQGISLDDVTLSYGKHVITHDLLFTHFGLSGPAALRMSSFVKGGEVLSLDVLPQLSEKDLVTFLEENR-EKSLKNALKTLLPERLAEFFVQ-G-YP-EKVKQLTEKEREQLVQSIKELKIPVTGKMSLAKSFVTKGGVSLKEINPKTLESKLVPGLHFAGEVMDINAHTGGFNITSALCTGWVAGSLHYD
3V76 Chain:A ((28-417))---------QDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHA-S--PRNFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLFCD-HSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAA-DAEARFGKAAFREAVLITHRGLSGPAILQISSYWREGEEIVLRLMPDIDIASILKGMRRANGRQAVQTALADILPRRLAQFFADEAKLTGRMLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRTMQAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV--


General information:
TITO was launched using:
RESULT:

Template: 3V76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2206 20997 9.52 55.11
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 9.52
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_3V76.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V76-query.scw
PDB file : Tito_Scwrl_3V76.pdb: