Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFTKKDLLQQRMLIDQLRTQNSLSPQNAAKLGQSIASSWERSASAAIPKERFAAPLLEKKSASQNALDLALSQCADDLRHIAEQSSMVIAVGDIGSTIIWTASSAQMQSAAERVHFVQGG---QWREEFVGTNALALSLKTQQSSCVFSNEHYMESIHDWVCYAAPIIDPYSKQTLGVVDLSTTWKNHNTLGILAAERCASIIQSALLEQQRQQ-LHIRAFSTPQVKFNGKSLLLTPRQIEILTILAL--CP-HGL-TLENLYQALYGERKVSMGTLKAEMSQLRDILGGLLGSRPYRLLVHVEADFLQAEQALDAGYVASALQLYAGVFLAKTESPFLCAWRDCLESRLSDAIFKAQETDLLLKHLAHFPEAIDAVERLMELLPSEHPAHQLLVKYIDSPKLS
5LOE Chain:A ((39-228))-------------------------------------------------------------------------------------DSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDL-FQAGLTTIVPIIG--GGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKA---VVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRV----GITRSVIVNALRKLE-----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5LOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 630 -6195 -9.83 -34.04
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -9.83
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.331

(partial model without unconserved sides chains):
PDB file : Tito_5LOE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LOE-query.scw
PDB file : Tito_Scwrl_5LOE.pdb: