Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHRLSKIYTRTGDSGTTGLGDGSRVAKDDLRIAALGDVDELNAIIGVLRAQI-TDSQVANKADWDKSLSLIQHWLFDLGGEVCIP------NYNLLQPVCIEFLEKEIDCMNEDLPMLKEFILPSGSLSCSYAHQARAVCRRAERSLMSVQSCDQNIQATALQLLNRLSDWLFVASRALQRAEGGQEVLWQKNINEMI
2NT8 Chain:A ((37-216))------KIYTKNGDKGQTRIIGKQILYKNDPRVAAYGEVDELNSWVGYTKSLINSHTQVLSN-----ELEEIQQLLFDCGHDLATPADDERHSFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLMREEQ-INQDVLIFINRLSDYFFAAARYANYLEQQPDMLYR-------


General information:
TITO was launched using:
RESULT:

Template: 2NT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 728 -42535 -58.43 -245.87
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -58.43
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_2NT8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NT8-query.scw
PDB file : Tito_Scwrl_2NT8.pdb: