Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEGIKTIGVVGVGVIGASWTALFLYKGFKVKVYGPYPIDEELFKKRIQANLSDLLA---LDQQTDSSHHLQDIFLNLELYNNLKDAVIDADFIQENAPERLDLKQNLYQEITSYCPEKTLIASSSSGLKVSDFQKDATHPERIFLGHPFNPPHLLPLVEIVGGKLTDPQILKKASEFYQSLGKHPIVLNKEVKGHVANRLQAALWREAFSLVKEGVCSAEDVDIAITSGPGLRWALFGPYINMELANQKGFKEAIHHLGPPMTEW----WNDM--QN--FQHSEETTELLEEQTKELLTHYKDIDLSQKRDKGLVDILKLKQQLELD
3HDH Chain:A ((15-288))---VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSSISTSTDAASVVHSTDLVVEAIVENLKVKSELFKRLDKFAAEHTIFASNTSSLQITSLANATTRQDRFAGLHFFNPVPLMKLVEVVKTPMTSQKTLESLVDFSKTLGKHPVSC-KDTPGFIVNRLLVPYLIEAVRLYERGDASKEDIDTAMKLGAGYPM---GPF------------ELLDYVGLDTTKFIIDGWHEMDSQNPLFQPSPAMNKLVAEN----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3HDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1269 -22399 -17.65 -85.17
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -17.65
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.432

(partial model without unconserved sides chains):
PDB file : Tito_3HDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HDH-query.scw
PDB file : Tito_Scwrl_3HDH.pdb: