Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKALVAVKRVVDANVKVRVKPDNSGVDLTNVKMSINPFCEIAVEEAVRLKEKG-TVSEIVVVSIGPKEAQEQIRSAMALGADRGILV--ETTDEIGALEVAKILKGVVDAEKPELILLGKQAIDDDSNQVGQMLGALLGAGQGTFASEVKVDGG--KVQVTREIDGG-LQTVELALPAIITTDLRLNEPRYAALPNIMKARKKPLDTKSPADYGVTAGTKLKTIKVEAPAERKAGVQVKSVDELVEKLKNEAKVI
3CLU Chain:C ((1-217))MKILVAVKQTAALEEDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGMLQEVEINCPAVLTIQLGINKPRYAS---------KPIEEVSLADIGLSA--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1093 -17483 -16.00 -86.55
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain C : 0.78

3D Compatibility (PKB) : -16.00
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_3CLU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CLU-query.scw
PDB file : Tito_Scwrl_3CLU.pdb: