Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYRYTRKLRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQRVMVASGGEGGLGNTHFKSSTNRAPRKCTTGTKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVSAAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAG-LGIRFLKHLARTR-ILLHIIDVQPIDGSDPAHNAKAIMNELAKFSPTLANLPIVLVLNKLDQIAEES----REEWCQHILDELQWTGPVFKTSGLLEEGTKEVVYYLMDQIEQQREREVEDPEYAAEVRAFREQLEAETREQTIAAKEAYRAMRKAQRLESMMDDDDDFDDDEDDGDVESIYVRD
2QU8 Chain:A ((32-176))-----------------------------------------------------------------------------------------------------------------------------------------------------------------IILSGAPNVGKSSFMNIVSRANVDVQSY-----NLYVGHFDHKLNK-YQIIDTPGLLDRAFENRNTIEMTTITALAHINGVILFIIDISEQCGL----TIKEQINLFYSIKSVF-NKSIVIGFNKIDKCN--SLSIDNKLLIKQILDNVK-----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2QU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 564 -32066 -56.85 -244.77
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -56.85
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_2QU8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QU8-query.scw
PDB file : Tito_Scwrl_2QU8.pdb: