Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSWLSSLKSVFSPAQEVKEEEIQTVLQNYLLPDSKDALKERISQLQVQGRVLQLTINTFPDEKEYLQQIHDDLAGALQKCGIEELNLHVVQQKRPTQESSGQGCSSKAPKENSNLPPVLDASPKSEPDPNNPPIQKAALQQRDVPLHPRIKNVILVSSGKGGVGKSTTTVNLALALQKMGLKVGVLDADIYGPSIPTMLG----NAGKTPLIESENFVPLDAYGMAVLSIGHLTGDNNTPVAWRGP-KATGALMQLFNQTLWPDLDVLMIDMPPGTGDIQLTLAQRIPVTG--SIIVTTPQNVALLDATKGIELFNKVGIPVLGVVENMSTHICSNCGHEEQIFGIGGGDKLSEQYHIPLLARLPLNAQIREHADQGKPSVVAMDDA--ADSYIDIAKAVWQQIEKIPQRTRDDKRIF
1ION Chain:A ((3-233))-------------------------------------------------------------------------------------------------------------------------------------------------------RIISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDLTMANLSLVLGVDDVNITLHDVLAGDAKLEDAIYMTQFENVYILPG----AVDWEHVIKADPRKLPEVIKSLKGKYDFILIDCPAG---LQLR-AMSAMLSGEEAILVTNPEISCLTDTMKVGMVLKKAGLAILGFILN-------RYGRSERDI---PPEAAQDVMDVPLLAVIPEDPVIREGTLEGIPAVKYKPESKGAQAFIKLAEEV------------------


General information:
TITO was launched using:
RESULT:

Template: 1ION.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1315 -3729 -2.84 -16.80
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -2.84
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_1ION.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ION-query.scw
PDB file : Tito_Scwrl_1ION.pdb: