Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISGQTKLAGLFADPASHSLSPLMHNTAFEANNIDAVYLAFQVNPMNLKQAVESI---RTFDMLGVNLSMPNKTAVIPYLDEVSQEAQLIGAVNTIVHEKGRLIGYNTDGAGFMQSVQEAGISIKKKKMTLLGAGGAAKAVTVQAALDGAEEIVVYKRNNQTFAQVKETFEQLSYRTSCKIKVR-DFADTHQLRKDLKESCLLVNATDIGMGKKINQSPLLDISMMHENLAVFDLIYAPRETRLLKEAKKVGAKGYNGLGMLIYQGAIAFELWTKEKMPIHVIEKLFD
3DOO Chain:A ((5-248))----------VIGNPISHSLSPLMHHANFQSLNLENTYEAINV-PVNQFQDIKKIISEKSID--GFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLVKDGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGI--------ANEL--YKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESH-----LDEFDIIINTTP-----------VISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVHQGAESFKIWT--------------


General information:
TITO was launched using:
RESULT:

Template: 3DOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1192 -31587 -26.50 -136.74
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -26.50
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.339

(partial model without unconserved sides chains):
PDB file : Tito_3DOO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DOO-query.scw
PDB file : Tito_Scwrl_3DOO.pdb: