Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPVVHAFRASQSGLDAGAMKRSSDSHSPPFFFLSSACLAYRTSPMPSPRFARPELNGIITVRRFQRPQLETEAPIRKGDLKEPLEAVAGRVGLRARCSTSAPSADLCLVDDHELVLMGKLVDKGVYYITGGVCIDAEGSDTSSQSPTAALVSSTACGAAPQPPDITVGWCFDARMLLHRSDMN-RSPETPHRLQRAIETLQGCERALDVLPVELLAPFTVHKDSSSGSDLGRAVPPISAANRSQWIPARLATYDEVCSFQDPQVYEHFLKSGAAL----VNLKSD----VYCNDETSSVAVRLSAGAVIDASVAALRGVAASRSGTASSAAGRVHPLVSFCLVRPPGHHCTASQPSGFCLVNNVAIAVQQLRIRHASALPSGPPRIAILDLDVHFGEGTASFVEGACDPASLLYLSLHRYDKRQFYPFDGRGDTAYVGGSRHAASKGSICNVAVHTNGQQPARCEQVISDHLMNSVLEEIFLPRLAEFGPDLVMVSLGFDAAYGDPLGKMAVE-GGFASVLSRLKWWCLHDGRTAGLVVVLEGGYNPEAVAQGV---LSVALALSLPRTDPL----------LQRFLEEKSPKVWSDLRQRQERRHREWQQLREERAEEDVGAAPSGLGSELKPAASDEPEQVQEDALLLDRHKRWCAALVAKVQQIHREAMTRER
5EFJ Chain:D ((8-364))---------------------------------------------------------------------------------------------------------------------------------------------------------------P-----ITGLVYDQRMMLHHNMWDSHHPELPQRISRI---------------------FSRHEE-------------LRLLSRCHRIPARLATEEELALCHSSK-HISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCAL-LAAGSCFNSAQAILTGQV--RNAVA--------------IVRPPGHHAEKDTACGFCFFNTAA-----LTARYAQSITRESLRVLIVDWDVHHGNGTQHIFE---EDDSVLYISLHRYEDGAFFPNSEDANYDKVG-----LGKGRGYNVNIPWNGGKMGDPEYMAAFH-------HLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLM--SLAAGR---VLIILEGGYNLTSISESMSMCTSMLLGDSPPSL-HLTPLKTSATVSINNVLRAHAP-FWSSLR-----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5EFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2159 -21845 -10.12 -65.60
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.67

3D Compatibility (PKB) : -10.12
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_5EFJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EFJ-query.scw
PDB file : Tito_Scwrl_5EFJ.pdb: