Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSTLENCLVQGGRFRVGRRIGGGSFGEIFLGVDTQTGEAVAIKVERSKAVHPQLFSESRYYTLLSQGRGAAYMPTIFGYSSECEFNVMAMELMGFSLEDLHEKCGSRFSLKTTLMLADQILWLIELVHSHSILHRDIKPDNFIMGRGKKAHHVHIIDFGLAKKYRDSQTNMHIPYKEGKSLTGTARYCSINTHLGAEQSRRDDMEGIAYLLIYFLRGSLPWQGLKTATKEQKYGLIAHVKMSTSVESLCKGLPIEFASFLNYSRALRFEDRPDYGYLRSMFRRLFEREGYQEDYVYDWTVRSMYETLTARQRKNAAKRGKKQKENTREESDIFFERENTES
4JJR Chain:A ((6-292))-----------GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV----PQLHIESKIYKMMQGGVG---IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN---TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL------QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1353 -144462 -106.77 -527.23
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -106.77
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_4JJR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JJR-query.scw
PDB file : Tito_Scwrl_4JJR.pdb: