Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLRKMKIPFLLLFFLWEAESHAASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLCTPSRAAFMTGRYPVRSGMASWSRTGVFLFTASSGGLPTDE-------ITFAKLLKDQGYSTALIGKWHLGMSCHSKTDFCHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTL--------FLGFLHYFRPLNCFMMRNYEIIQQPMS-YDNLTQRLTVEAAQFIQR----NTETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLLDELRLANDTLIYFTSDQGAH---VEEVSSKG-------EIHGGSNGIYKGGKANNW-----------------------EGGIRVPGILRWPRVIQAGQKIDEPTSNMDIFPTVAKLAGAPLPEDR-----IID--GRDLMPLLEGKSQRSDHEFLFHYCNAYLNAVRWHPQNSTSIWKAFFFTPNFNPVGSNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRERNPLTPASEPRFYEILKVMQEAADRHTQTLPEVPDQFSWNNFLWKPWLQLCCPSTGLSCQCDREKQDKRLSR
4CXU Chain:A ((3-515))------------------------KRPNFLVIVADDLGFSDIGTFGGE-IATPNLDALAIAGLRLTDFHTAS-A-SPTRSMLLTGTDHHIAGIGTMAEA----L--------GYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQT------PHARGFERSFAL--------LPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTL--PEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAP-HWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLDFLDRH-YDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAA------------------HDENTVTGWGLF----GMRAIRQGDWKAVYLPAPVGPATWQ-----LYDLARDPGEIHDLADSQPGKLAELIE-------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2695 24581 9.12 55.36
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 9.12
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_4CXU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CXU-query.scw
PDB file : Tito_Scwrl_4CXU.pdb: