Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEADALSPVGLGLLLLPFLVTLLAALCVRCRELPVSYDSTSTESLYPRSILIKPPQITVPRTPAVSYPLVTSFPPLRQPDLLPIPRSPQPLGGSHRMPSSQQNSDDANSVASYENQEPACKNVDADEDEDDYPNGYLVVLPDSSPAAVPVVSSAPVPSNPDLGDSAFSVESCEDYVNVPESEESAEASLDGSREYVNVSPEQQPVTRAELASVNSQEVEDEGEEEGVDGEEAPDYENLQELN
5T42 Chain:A ((24-41))---------PAGIGVTGVVIAVIALFA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5T42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 15 -3662 -244.13 -203.44
target 2D structure prediction score : 0.28
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -244.13
2D Compatibility (Sec. Struct. Predict.) : 0.28
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.386

(partial model without unconserved sides chains):
PDB file : Tito_5T42.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T42-query.scw
PDB file : Tito_Scwrl_5T42.pdb: