Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQITAVTTSSVTTKQAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLGAFKLPVEVVQYGAEQVFRHFERAGYKPSFREKDGQRFVTDMQNFIIDLALDVIENPIAFGQELDHVVGVVEHGLF-NQMVDKVIVAGRDGVQISTSKKGK 1KS2 Chain:A ((4-215)) -DELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALG---TMKGQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYR----QGVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVK--------

General information: TITO was launched using: RESULT: Template: 1KS2.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1229 -108506 -88.29 -514.24 target 2D structure prediction score : 0.44 Monomeric hydrophicity matching model chain A : 0.80 3D Compatibility (PKB) : -88.29 2D Compatibility (Sec. Struct. Predict.) : 0.44 1D Compatibility (Hydrophobicity) : 0.80 QMean score : 0.374

(partial model without unconserved sides chains): PDB file : Tito_1KS2.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1KS2-query.scw PDB file : Tito_Scwrl_1KS2.pdb: