Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDSSNQLMPLSLSAPGVNLGAYISTVNQIPILTAEQEKELAER-----------------------------YYYDQDLDAAK-MLVMSHLRFVVHIARSYAGYGLPQGDLIQEGNLGLMKAVKRFDPNMGVRLVSFAVHWIKAEIHEYVIRNWRIVKIAT---------TKAQRKLFFNLRSLKKSSKKLTLEEAQSIANDLNVTPEQVLEMEGRLTAYDAAFEAQGDDDDDTPHTAPVLYLEDNR----YDPARLVENEDWEEQSTSALHDAMNQLDDRSRNILQRRW--LDDDKSTLHELAAEYNVSAERIRQLEKNAMEKIKVAMSAS
5UHF Chain:F ((221-515))------------LTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMTELSERGEKLPAAQRRDMMWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDL------GREPTPEE---LAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGD----FIEDSEAVVAVDAVSFTLLQDQ-------LQSVLDTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLR------


General information:
TITO was launched using:
RESULT:

Template: 5UHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 648 10768 16.62 43.07
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain F : 0.73

3D Compatibility (PKB) : 16.62
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_5UHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UHF-query.scw
PDB file : Tito_Scwrl_5UHF.pdb: