Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFVFNGFYTLISAVIVLLLGRFLVNRI-DFLERYNIPEPVAGGLVAAVVSLLVHTFWGYSIV-FS--SELQTSF----MLVFFASIGL-SANFMKLKEG-GTALVIFLICVASFIVVQNAVGMSLATLLGLDPLIGLIAG--SITLTGGHGTAGAWGEILESQHGIQGALALGMASATFGLIM-CVIGGPLAKLLINRYSLAQAKTNAEIQQRDTHVEQNSDDLAPFENPHQVRLITADNAITTLGMFAACLAFAEFMTGFSKGTWFELPTFVWALGGGVILRNILESVLKVDIFDRAIDVFGNASLSLYLAMALLSLKLWQLADLAGPLVVILVAQTLTMALYAAFVTFRVMGKNYDAAVLAASHCGFGMGATPTAVANMQAITNMYGPSHKAFLIVPLCGAFFVDLINATVIQLMLKFIA
5A1S Chain:D ((269-445))-------AVGMVLSTTCFLLAYVVAKKILPSIGGVSIHYFAWMVLIVAAL----NASGLCSPEIKAGAKRLSDFFSKQLLWVLMVGVGVCYTDLQEIIDALTFANV---VIAAIIVVGAVVGAAIGGWLIGFYPIESSITAGLCMANRGGSGDLEVLS---AC-N-RMNLISYAQISSRLGGGIVLVIASIVFSMM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5A1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 431 -51978 -120.60 -316.94
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.53

3D Compatibility (PKB) : -120.60
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.086

(partial model without unconserved sides chains):
PDB file : Tito_5A1S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5A1S-query.scw
PDB file : Tito_Scwrl_5A1S.pdb: