Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------MTYFMTKSA--VKRKNSDIKKPLHAQTGVVYRHSVEVNQMN---TNNLSNQQQIIQSWFEPALHTLKALIKKCEENLERIKGDTKNAAVRREEFKEALARQHCITYNHAEEIIRSLSRVDRIRFLGSTYIQIKEGGEA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4CI7 Chain:A ((4-470))GSHKTLDGVETAEYSESYLQYLEDVKNGDTAKYNGVIPFPHEMEGTTLRKSSVAYNPMDLGLTTPAKNQGSLNTAWSFSGMSTLEAYLKLKGYG----------------------------TYDLSEEHLRWWA----------------TGGKYGWNLDDMSGSSNVTAIGYLTAWAGPKLEKDIPYNLKSEAQGATKPSNMDTAPTQFNVTDVVRLNKDKETVKNAIMQYGSVTSGYAHYSTYFNKDETAYNCTNKRAPLNHAVAIVGWDDNYSKDNFASDVKPESNGAWLVKSSWGEFNSMKGFFWISYEDKTLLTDTDNYAMKSVSKPDSDKKMYQLEYAGLSKIMSNKVTAANVFDFSRDSEKLDSVMFETDSVGAKYEVYYAPVVNGVPQNNSMTKLASGTVSYSGYINVPTNSYSLPKGKGAIVVVIDNTANPNREKSTLAYETDIDGYYLYEAKANLGESYILQNNKFEDINTYSEFSPCNFVIKAITKTS


General information:
TITO was launched using:
RESULT:

Template: 4CI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 113 13409 118.66 150.66
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : 118.66
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.242

(partial model without unconserved sides chains):
PDB file : Tito_4CI7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CI7-query.scw
PDB file : Tito_Scwrl_4CI7.pdb: