Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQTLRASKCGLSTAQLPSSILDVIDSLTKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPSQIKEVFGRRCRIIGR---RFELAHVYSGRELIEVATFR--APPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPR---KGIVLDFCKAIDDVKSKTLRLLGDPVQRFEEDPVRMLRTLRFAAKLNFKIDPAILDIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLARVLPMLIAFGVWKQLFADIRPDLTPFIQRAAKNTDQRIQVGKTINPAFFYAVLLWQPFLERCDFYLSKGVVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALASHARFRAGFDFLLLREKSGDDTTQGMGSWWEAYQEMSNDEKEAAISQYNRQKAKSRRKVAAEPVESNKVDTEIEPLVDVPEPRSRRGKKERARQEQSIDRFIEKSSAAQTNVMSDHPILKRKRVQRDLSQVIFGPTQ
4WC1 Chain:A ((10-173))------------------------------GLRAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEFGTAHLKIGKLKLEFATARRE--------PAS-----------LKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLRDLKDKVIRVL-HPVS-FIEDPVRILRALRFAGRLNFKL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4WC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 618 -18614 -30.12 -134.88
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -30.12
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_4WC1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WC1-query.scw
PDB file : Tito_Scwrl_4WC1.pdb: