Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSYANLLKPLHLGFTTIKNRVVMGSMHTGLEDRFFNYPK--LAAYFEERAKGGVGLIVTGG--ISPNRQGWLAPAGGTMNSLFDIPQHRLVTHAVHKHGSKILMQILHAGRY-------GYQPFVVSSSPIKSP---------------ISPFKPRQLSEKNILSTIEDYAQCADIAKKAGYDGVEIMGSEGYLINQFLSRHVNQRTDRWGGEIENRMRFPVEIVKAIRAKVGEKFIICFRLSLLDLVH---DGNTMQEVVTVAKALEKAGVTLLNTG-IGWHEARVPTIVTSVPRAAFVDYTAHVKQHISIPVIASNRINMPETAEEILATGKADMIQMARPLLADAFWVNKTATNRVDEINTCIACNQACLDHAFKNKRVSCLVNPRAGHETELVYLKTKQPKRIAVVGGGVAGMSAATVAASRGHAVTLFEANADVGGQFNFAKVVPGKEEFHETIRYFKVQLQKTGVDVRLNTRVNREQLEREGFDEVIVATGVVPRALKIEGSNSPQVLSYAQVLQGAEVGRKVAVIGAGGIGFDVSEFLLKPPHQPQSQPLAEWQREWGVDPDPNYVSEGGMQPPVVEPAIREIYLLQRKTTPLGVGLGKTSGWVHRAQLKKHGVRMLRGVQYKAVTDEGLWIEHNGQDQLLRVDTVVVCAGQESVKDLMPKEGESTIANYHIIGGAKLAAELDAKRAIKEGAELAAQL
2GQA Chain:A ((4-328))-----SLFQPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAG--LIVSEGTQISPTAKGYAWTPG--IYTPEQIAGWRIVTEAVHAKGCAIFAQLWHVGRVTHPDNIDGQQP--ISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAER-VGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA--PDTPVSFKRA--------LREAYQGVLIYAGRYNA-EKAEQAINDGLADMIGFGRPFIAN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1794 -3746 -2.09 -12.70
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -2.09
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_2GQA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GQA-query.scw
PDB file : Tito_Scwrl_2GQA.pdb: