Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIYLARNNQQAGPYTLEQLNQMLASQQVLLTDLAWHEGMTEWKALGELTQGKLVYQPTGYSAFSANTNTPYNETIQHIRVETKTHELASISSRALAKIIDLLLWLPIAAIPSFFFNEAQYKQLFELQKQMQSAEVASTKAAELQQQLFTLIPIEAWHTMLLYVVIMLAIQAFLLTKFGQSIGKKIVGIRIVDAENNGKVNLTRIFLLRSVVFIILNLLFMPISTIIDYAFALGQKRQALHDKIARTKVIK
5GHS Chain:D ((41-59))----LGPDMKEYGPFMAGDMAII------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 16 -1622 -101.34 -85.34
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain D : 0.47

3D Compatibility (PKB) : -101.34
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.47
QMean score : 0.651

(partial model without unconserved sides chains):
PDB file : Tito_5GHS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GHS-query.scw
PDB file : Tito_Scwrl_5GHS.pdb: