Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELNLKEDWSKKMKTALNRTPASFPVRRMDYNFEDTPRYWCNHEPSLTHYFTGLSTLFPEGESYFVRSVRALR-AKAKE-NEILDREIGAFIGQEAMHSKEHHAFHVSAQQYGLNPESLEKATG-----IVL----KAIEKVF----SKKW--N-LLVTVGLEHYTAVLVVSMMQSVN--ELMTENTIRNLWLWHSVEETEHKAVAYDLYQHLYGNGLDAYIPRVGIFTFSLVLITAFSTIYHIVLMKRDKQLTNFKTWRNFFKFASKQYKVLIPKFLEYYRFDFHPNQTDEKALVAATKVKLGINDRSLLLS
5DCS Chain:A ((73-231))---------------------------------------------------LPLVAGFSAGEEAVTLDILPMAHALARQGRLEDVLFLTTFMHDEAKHVEMFSRWQQAV---GIGQMDLSVFHNDHYKRIFYEALPEAMNRLYADDSPEAVIRAATVYNMIVEGTLAESGYYTFRQIYKKA-GLFPGLLQGIDYLNMDEGRHIQFGIYTIQRIV---------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5DCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 432 -19238 -44.53 -138.40
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -44.53
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.232

(partial model without unconserved sides chains):
PDB file : Tito_5DCS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DCS-query.scw
PDB file : Tito_Scwrl_5DCS.pdb: