Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHRNSGVKLGRTSSHRKAMFQNLANSLFEHELIKTTLPKAKELRRVAEPLITLAKNDTVANRRLAFARTRNAATVGKLFTVLGPRYKERNGGYLRVLKAGFRAGDAAPMAYVELVDREVNTSAE
5GAH Chain:O ((1-118))MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDR-------


General information:
TITO was launched using:
RESULT:

Template: 5GAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 414 -38611 -93.26 -327.21
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain O : 0.91

3D Compatibility (PKB) : -93.26
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_5GAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAH-query.scw
PDB file : Tito_Scwrl_5GAH.pdb: