Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------MRLMINKSMKNIYIMGLLLACSGFAMAETVTQ----------QPTGQPVRTASNPNAIRIVTRPEIMGLW----------GMEIPNNKKCVEYYNFRS----SNDVVIKSG--EEWSYGIYEYQPS------DDPKEQLSALVMQIKFDNNKVDCSGQKQDQTGDISQYFVQWKNDH--------TINFCSTAKGEQCFATLRRMLP-----------
3HK0 Chain:A ((8-250))KQDVKVFSEDGTSKVVEILADM-TARDLCQLLVYKSWTLVEHHPHLGLERCLEDHELVVQVESTMASESKFLFRKNYAKYEFFKNPMNFFPEQMVTWSQQSLLQNFLNSSSSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYGMLLYQNYRI


General information:
TITO was launched using:
RESULT:

Template: 3HK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 571 -1297 -2.27 -7.81
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -2.27
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.146

(partial model without unconserved sides chains):
PDB file : Tito_3HK0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HK0-query.scw
PDB file : Tito_Scwrl_3HK0.pdb: