Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARNADYIDIAGFTIAPQTLLPYGHLYNASLAGNQLNSAHGFAGPILAAPIWLINKPERFFAIAPYLYVPIGTYHSDEALNIDENRWKFDLQLGVFNNVAMIFLPKSRPMLFDMVHMMILLE
5M9E Chain:E ((1-19))---------------------------RRSLAGSMLQKPTQFSRPS----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5M9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 5 -359 -71.80 -18.89
target 2D structure prediction score : 0.95
Monomeric hydrophicity matching model chain E : 0.46

3D Compatibility (PKB) : -71.80
2D Compatibility (Sec. Struct. Predict.) : 0.95
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.920

(partial model without unconserved sides chains):
PDB file : Tito_5M9E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5M9E-query.scw
PDB file : Tito_Scwrl_5M9E.pdb: