Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRQLVSSSRVEQKNWDR--------PVLSEWIEQFVNTVQAVQ-TPVQIVAHSFGCLTSVAALAEHPELQLQVKKLILVAPANPARFGE------A-----------GF---AR-H------------------SLTDYK------------DYF---HQ--LKINVPATLLISENDPWLDFFDALQLAKSW-QLTPINLGQVGHINVASGFGPFPDLLNHLLPEDSMCSHSSIDPVKTHFSLKFA
1IUN Chain:B ((56-276))------RVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYS---ERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEANTP-----------------


General information:
TITO was launched using:
RESULT:

Template: 1IUN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 548 -17130 -31.26 -110.51
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -31.26
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_1IUN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IUN-query.scw
PDB file : Tito_Scwrl_1IUN.pdb: