Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSKDTIIALHAEHQGRWKNREEIAERMIALIGQLYREKNIVVSVYGRSLINRSVIQILKTHRRTRVVDVELSVVNTFPILEALAKVENIGSAEVDIGKLAVEYKEKGGDVDAFVAQAVESIKGSATSEQPKDVVLYGFGRIGRILARLIISQSGLGRGLSLKAIVVRKSSDGDLAKRAS-LLRRDSIHGTFAGTISVDEENEAIIANGNFIKVIYASSPSEVDYTQYGIENALLIDNTGKWRDAEGLSQHLKCPGVARVVLTAPSKGEMKNVVFGVNNSDILDEDKIISAASCTTNAITPILKVLDDKYKVLNGHVETVHSFTNDQNLIDNYHKADRRGRAATLNMVITETGAAKAVAKALPALKGKLTGNSVRVPTPNVSLAILNLTLDKEVDREEVNEYIRQISINSNLQGQIGYTNSTEVVSSDFIGSRTAGVYDAQATITSGNRLTAYV-WYDNEVGYSCQVLRIAEQMCGVSYKKIPAETNA 1RM5 Chain:O ((4-329)) ------------------------------------------------------------------------------------------------------------------------------------VAINGFGRIGRNFLRCW-----HGRKDSPLDVVVINDTGG--VKQASHLLKYDSILGTFDADVKT-AGDSAISVDGKVIKVVSDRNPVNLPWGDMGID--LVIEGTGVFVDRDGAGKHLQA-GAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAAHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRE-SADNELKGILSVCDE-PLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLAD----------------

General information: TITO was launched using: RESULT: Template: 1RM5.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 1769 -14611 -8.26 -45.09 target 2D structure prediction score : 0.58 Monomeric hydrophicity matching model chain O : 0.73 3D Compatibility (PKB) : -8.26 2D Compatibility (Sec. Struct. Predict.) : 0.58 1D Compatibility (Hydrophobicity) : 0.73 QMean score : 0.456

(partial model without unconserved sides chains): PDB file : Tito_1RM5.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1RM5-query.scw PDB file : Tito_Scwrl_1RM5.pdb: