Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPFFGFTPSEGLLNDIQTGIANKNSSEPLYPLRDKIALQLNEEIIENVLTQLVQHFPASEKRDTAEKLAGYVKSTVAVLLKQLLSKAPNDVVKQSVEFSEKSLFKDPQGQYKVGVALDAGLVTNLKHNFAELQAGNDINKAALAELYKQFGDAMVRHFMSDFNKTLDLGMIKRKAADIGAAAVTKAVHIAIDKLIPSLNRTELKAMAEYHDGLFFN
2PG1 Chain:E ((8-28))-----------------------------SQFIVDDVSKTIKEAIETTIG----------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 9 -585 -64.94 -27.83
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain E : 0.53

3D Compatibility (PKB) : -64.94
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.656

(partial model without unconserved sides chains):
PDB file : Tito_2PG1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PG1-query.scw
PDB file : Tito_Scwrl_2PG1.pdb: