Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMQAKEVVDQVTMKRALTRITYEIIERNHSIQDIVLVGIKTRGIYIASRIAERLKQLEDIDIPVGELDITLYRDDKKENPEEPELHSSDIPVSLEGKEVILIDDVLYTGRTIRAAMDAVMDFGRPRKISLAVLVDRGHRELPIRADYVGKNIPTSRAEEILVEMQELDGQDRIMILKEED
4P83 Chain:A ((5-178))----KAVIMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGAPVPVGEIDITL---------DEPLVKGTNVPFPVTERNVILVDDVLFTGRTVRAGMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELDEVDQNDQVSI-----


General information:
TITO was launched using:
RESULT:

Template: 4P83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 845 -134236 -158.86 -823.53
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -158.86
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.627

(partial model without unconserved sides chains):
PDB file : Tito_4P83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P83-query.scw
PDB file : Tito_Scwrl_4P83.pdb: