Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNRFASKEEEKLYYEHKASEEEFLNWYQKQERPEYDKPSLTVDIVLMCYNKEEDQLKVLLIQRKGHPYRNSWALPGGFVQKDESTGESVLRETKEETGVVISKENIEQLHTFSTPNRDPRGWVVTVSYLAFIGEEPLIAGDDAKEVRWFTLERHSNKIHLSSGEVAISLDLVTGESSGKDTLAFDHSQIILKAFNRVVNKMEHEPQVLQVLGKDFTITEARKVFAKFLGIDYKTIDHSNFKKAMLQYFDEIGERPVGIGRPSKIYQLKPGHHE 2YYH Chain:A ((8-132)) -------------------------------------PLLATDVIIRLWDGENFK-GIVLIERKYPPV--GLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGV--YSDPERDPRAHVVSVVWIGDAQGEPK-AGSDAKKVKVYRLE-----------EIPL------------DKLVFDHKKIIL----------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 2YYH.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 639 -56482 -88.39 -451.86 target 2D structure prediction score : 0.52 Monomeric hydrophicity matching model chain A : 0.69 3D Compatibility (PKB) : -88.39 2D Compatibility (Sec. Struct. Predict.) : 0.52 1D Compatibility (Hydrophobicity) : 0.69 QMean score : 0.377

(partial model without unconserved sides chains): PDB file : Tito_2YYH.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2YYH-query.scw PDB file : Tito_Scwrl_2YYH.pdb: