Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVSDELIIGLVKERIAQPDCVNGCIFDGFPRTIPQAEALEKEG----ISIDHVIEIDVPDEEIVKRLSGRRQHPASGRVYHVVYNPPKV--EGKDDETGEDLVQRPDD-QEETIRKRLASYHTETEQL---VGFYQGRAASGENAPTYDKLDGLRTIEDVQKDLFNILDK
2XB4 Chain:A ((1-223))MNILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLES-KGKDGWLLDGFPRNTVQAQKLFEALQEKGMKINFVIEILLPREVAKNRIMGRRICKNNPNHPNNIFIDAIKPNGDVCRVCGGALSARADDQDEGAINKRHDIYYNTVDGTLAAAYYYKNMAA--KEGFVYIELDGEGSIDSIKDTLLAQLA-


General information:
TITO was launched using:
RESULT:

Template: 2XB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 915 -26982 -29.49 -126.67
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -29.49
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_2XB4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XB4-query.scw
PDB file : Tito_Scwrl_2XB4.pdb: