Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAQSKVLITGASSGIGSVYADRFAQRGYHLILVARDTNRLDKISKDLQEKYGLQVEFIQADLSNDQDIRKIEDVLKNDADIEILVNNAGIALNGNFLTQDRNEIEKLLTLNITAVVRLSHAMSQSLIRKGKGAIINLGSVLGLAPEFGSTIYGASKSFIQFFSQGLHLELKDHGVHVQAVLPSATKTEIWERSGI--------DL--------SQVP--PLMDVNDLVDAALIGFDRKETITIPVLKDENQWNNFEKSRMTLLPNFSSAEVAQRYKN
5IDY Chain:B ((13-246))-IAGKTALVCAASKGLGRGCAEALAAEGVNLVIVARTRDTLERTADEIRAASNVSVATVACDITTPDGRAAALA---ACPQPDILVNNAGGPPPGDFRDFSHDDWIRALESNMLTPIELIRATVDGMIARGFGRIVNITSSAVKAPIDVLALSNGARSGLTGFVAGLARKVVGQGVTINNLLPGLFDTDRIATTLAAAANAQGVTVDELRARRTRDIPAGRLGTRAEFGAACAFLCSV----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 997 -100790 -101.09 -466.62
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -101.09
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_5IDY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IDY-query.scw
PDB file : Tito_Scwrl_5IDY.pdb: