Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKEIISSKDLHLYYGKKEALKGIDLSFNQGEITAMIGPSGCGKSTYLRSLNRMNDLIP---NVTITGSVLYK-DKDIYGPKTDVVELRKEIGMVFQQPNPFPFSIYENVIYGLKLKGEKDKKVLDQVVEESLKAASVWDDV-------KDKLHKSALSLSGGQQQRVCIARVLAVNPEIILLDEPTSALDPVSTGKIESMLLELRER-YTMIIVTHNMSQASRISDKTAFFLDGHLIEYNDTKKIFMNPEKQETEDYISGRFG
5L22 Chain:A ((344-545))---------------GKTPVLRNINMRILPGEFVAIIGPSGSGKSSLVRTI--LGIWLPVHGTVEIDGADLKQWDRDYFG---------KFVGYLPQDIELFEGTVAENIARFGELDSEK--------IIEAAKLSGAHDVIIKLPDGYDTYIGPGGITLSGGQRQRIALARALYGNPRIVILDEPDSNLDEQGEQALYNALIELKKRKVTTIIVSHRIRLLNLV-DKIAIMQDGTL---------------------------


General information:
TITO was launched using:
RESULT:

Template: 5L22.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 868 3934 4.53 20.71
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 4.53
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_5L22.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L22-query.scw
PDB file : Tito_Scwrl_5L22.pdb: