Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKLYDVIVVGAGTSGMMAAISAAEQGARVLLIEKNKKAGKKLLMTGGGRCNVTNNRPVDDLIAHIPG-NGKFLYSTFAQWNNFDIMNFFESQGVHLKEEDHGRMFPVTNKSKTIIEALLNRLKELDVTLLFSTRVEKLIHKE-HKIY-GIRTEFE-EFHAPAIILTTGGRTYPSTGSTGDGYKIVKRVGHTVTPLYATESPLISDEP--YIQEKTLQGLSLQDITLRVLNKK-GRVLTEHTMDLLFTHFGISGPAALRCSSFVNKELEKTGEPVTLSLDCFPTQTKQ-ELIHILTEKSKA-TKKNLVNAWHGILPERLLVFFLERLEMDHLTGQQASQKQIQDFVQLCKEFKLSINKTFPIEKSFVTGGGVSLKEIYPKTLESKIIDGLYFAGELLDVNGYTGGFNITAAFATGHVAGMNAGQRA
2GQF Chain:A ((1-401))MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPA---HYLSQNPHFVKSALARYTNWDFISLVAEQGITYHEKELGQLFCDE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETDKFLT--ALSGISL-P---VTITALCGKSF---YNQLLFTHRGISGPAVLQISNYWQP----T---ESVEIDLLPNHNVEEEIN----QAKQSSPKQMLKTILVRLLPKKLVELWIEQGIVQDEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVTMGGVDTKVISSKTMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISRQ-


General information:
TITO was launched using:
RESULT:

Template: 2GQF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2293 -27320 -11.91 -69.69
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -11.91
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_2GQF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GQF-query.scw
PDB file : Tito_Scwrl_2GQF.pdb: