Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRFASKEEEKLYYEHKASEEEFLNWYQKQERPEYDKPSLTVDIVLMCYNKEEDQLKVLLIQRKGHPYRNSWALPGGFVQK--DESTGESVLRETKEETGVVISKENIEQLHTFSTPNRDPRGWVVTVSYLAFIGEEPL-IAGDDAKEVRWFTLERHSNKIHLSSGEVAISLDLVTGESSGKDTLAFDHSQIILKAFNRVVNKMEHEPQVLQVLGKDFTITEARKVFAKFLGIDYKTIDHSNFKKAML--QYFDEIGERPVGIGRPSKIYQLKPGHHE
3GZ5 Chain:A ((21-229))-------------------------------------QLLTVDAVLFTYH--DQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVP--PYIEQLCTVGNNSRDARGWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVL-----------------------QMPLAFDHLQLIEQARERLTQKALYSLVPGFALSEPFTLPELQHVHEVLLG---KPIQGKSFRRRVEQADLLIDTGLKRT----PANLYCLKPDT--


General information:
TITO was launched using:
RESULT:

Template: 3GZ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 939 -26251 -27.96 -131.25
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -27.96
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_3GZ5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GZ5-query.scw
PDB file : Tito_Scwrl_3GZ5.pdb: