Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEAQEIIRYIQTASKKTPVKVYLNVTEP-IEFKE------SKVFGEGSSFVVFGDYETIAPVLEAESEKIIEIEIETAARYSAVPLLDIKKINARIEPGAIIRDQVSIGNNAVIMMGAIINIGAVIGENTMIDMGAVLGGRATVGKNCHIGAGAVLAGVIEPASAKPVIVEDGVLVGANAVIVEGVHIGKDAVVAAGAVVLEDVAAETVVGGIPARVLKISDDQTKENTALIAALREL
3R8Y Chain:A ((17-219))-------------EKKTPVKVYIKGDLKEVTFPETVQAFVNKKSGV-LFG-EWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKEI-----------------


General information:
TITO was launched using:
RESULT:

Template: 3R8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1053 -49045 -46.58 -250.23
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -46.58
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.632

(partial model without unconserved sides chains):
PDB file : Tito_3R8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R8Y-query.scw
PDB file : Tito_Scwrl_3R8Y.pdb: