Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNITKSTVANRMQLLKLAGCLEFFIDHFDEMLKNDTPILEILDQLLLAEQNHVTNKKVFNLLKKSNIRYLNSHLMEIDCSNKVGLNKEVLSSFMDCQWIKSKHNLIFTGATGIGKTWLASAFGTHVCKQGLKVLFFDTTELFEEFETASRLGTISLLKKKLLSCQLLILDDFGLSKVRVNWM-AHFISVIDKHTDH-GSLLITSQYETKIWLNHFE------DQTLGEALLDRIIHRAHIFNLQGESMRKKRGKSIAE
5HE8 Chain:C ((24-173))----------------------------------------------------------------------------------------------------QVKGLYLYGPFGTGKSFILGAIANQLKSKKVRSTIIYLPEFIRTLKGGFKDGSFEKKLHRVREANILMLDDIGAEEVTPWVRDEVIGPLLHYRMVHELPTFFSSNFDYSELEHHLAMTRDGEEKTKAARIIERVKSLSTPYFLSGENFRN--------


General information:
TITO was launched using:
RESULT:

Template: 5HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 602 -51410 -85.40 -362.04
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -85.40
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_5HE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HE8-query.scw
PDB file : Tito_Scwrl_5HE8.pdb: