Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFLNKIHETATFLKEKGIAAPEFGLILGSGLGELAEEIENPVVVDYAEIPNWGRSTVVGHAGKLVYGELAGRKVLALQGRFHFYEGNPLEVVTFPVRVMKVLGCEGVIVTNAAGGIG--FGPGTLMAISDHINMTG---QNPLMGENLDDFGPRFPDMSRAYTPEYRATAHEVAKKLNI--KLDEGVYIGVTGPTYETPAEIRSYKTLGADAVGMSTVPEVIVAAHSGLKVLGISCITNFAAGFQ---EELNHEEVVEVTERVKGDFKGLLKAILAEL
3FUC Chain:A ((4-282))GYTYEDYQDTAKWLLSHTEQRPQVAVICGSGLGGLVNKLTQAQTFDYSEIPNFP--------GRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQGKANHEEVLEAGKQAAQKLEQFVSLLMASI


General information:
TITO was launched using:
RESULT:

Template: 3FUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1420 -89486 -63.02 -342.86
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -63.02
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.621

(partial model without unconserved sides chains):
PDB file : Tito_3FUC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FUC-query.scw
PDB file : Tito_Scwrl_3FUC.pdb: