Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAE-ETSFGNAGQISPGYSTPWAAPGIPFKAVKWMFQHHAPLAINLDGSMWQLQWMAQMLKNCNPQSYAVNKERMMRVAEYSRDCLRELRKDTGIHYENRAKGTLQLFRKEAQMEAVQRDISVLEECGVSYELLNGNELGRVEPALANAQDKLVGGLHLPNDETGDCYLFTNALAQIAKELGVNFQFNQNVEKLIVEGDQIKGVQVNGKVLTADRYVLAFGSYSRDFLKPLDLQLPVYPVKGYSLTIPIVAPAF-----APQSTVLDETYKIAITR-F-DQRIRVGGMAELSGFNL-------GLNEDRHATLQMVTQDLFP-GGDMEQASFWTGLRPMTPDSTPIIGATR-FKNLFLNTGHGTLGWTMACGSGKLISDIVLNHKTDISTDGLSIQRYSHAHAA
2GF3 Chain:B ((4-381))FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGE-------------------G--------------------------------REYVPLALRSQELWYELEKETHH-KIFTKTGVLVFGPKGES-AFVAETMEAAKEHSLTVDLLEGDEINKRWPGITV--PENYNAIFEPNSGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSV-KIETANGSYTADKLIVSMGAWNSKLLSKLNLDIPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYMPGAN-GELKRGAVCMYTKTLDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALTGKTEHDISIFSINRPALK---


General information:
TITO was launched using:
RESULT:

Template: 2GF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2284 11969 5.24 33.15
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : 5.24
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_2GF3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GF3-query.scw
PDB file : Tito_Scwrl_2GF3.pdb: