Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIAVFASGNGSNFQVIAEE-------FPVEFVFSDHRDAYVLERAKQLGVLSYAFELKEFESKTDYEAALVELLEEHQIDLVCLAGYMKIVGPTLLSAYEGRIVNIHPAYLPEFPGAHGIEDAWNAGVGQSGVTIHWVDSGVDTGQVIKQVRVPRLADDTIDRFEARIHEAEYRLYPEVVKALFTD
3KCQ Chain:C ((8-189))ELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPL-----DIEHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQAAVPVLREDTAESLASRILAAEHVCYPKGVKLIAQ-


General information:
TITO was launched using:
RESULT:

Template: 3KCQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 869 -10123 -11.65 -57.84
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain C : 0.78

3D Compatibility (PKB) : -11.65
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_3KCQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KCQ-query.scw
PDB file : Tito_Scwrl_3KCQ.pdb: