Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYDDQNIFAKILRGELPAIKLYEDDQVLAFMDIMPQADGHALVIPKTPAVTLLDLPPEAAAYTIQIVQKIAKAMETALNLDGIVLMQLSGAAAGQTVPHVHFHLIPTNV-HQ-LG-KHAA--QLGDQDKIKALAEKIKAAL
3IMI Chain:A ((7-146))--TADNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGENDGFGAVWKSHQNEYTMENLQNIASTIANSV


General information:
TITO was launched using:
RESULT:

Template: 3IMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 480 -84370 -175.77 -624.96
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -175.77
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_3IMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IMI-query.scw
PDB file : Tito_Scwrl_3IMI.pdb: