Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MQPKFNLPRHCVMSKVVLEAKDIYKHFDDGKSKVEVIKGLSLQVEAGQFVSIVGASGSGKSTLLHVLGGLDQPTKGQVFLNGQRFDNLGEAERGFQRNQYLGFVYQFHHLLPEFTALENVAM--PLMLRADNQYKSVKAQAEYLLD--RVGLSHRMDHKPGELSGGERQRVALARALVTKPAVVLADEPTGNLDRKTAVGIFELLTDLKKELNMAMLIVTHDEQLAQAADSILHMEDGLWVNGS 3B5J Chain:A ((20-215)) -----------------------------------ILDNINLSIKQGEVIGIVGRAGSGKSTLTKLIQRFYIPENGQVLIDGH---DLALADPNWLRRQ-VGVVLQDNVLLNR-SIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICK--GRTVIIIAHRLSTVKNADRIIVMEKG------

General information: TITO was launched using: RESULT: Template: 3B5J.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 889 -38050 -42.80 -198.18 target 2D structure prediction score : 0.53 Monomeric hydrophicity matching model chain A : 0.74 3D Compatibility (PKB) : -42.80 2D Compatibility (Sec. Struct. Predict.) : 0.53 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.425

(partial model without unconserved sides chains): PDB file : Tito_3B5J.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3B5J-query.scw PDB file : Tito_Scwrl_3B5J.pdb: