Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPCHKEPIKKELVTLNYRNDIRNVAIIAHVDHGKTTLVDELLKQSDTLDAHT-------QLQERAMDSNALEKERGITILAKNTAVDYK-----GIRVNIMDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQHITPIVVVNKIDKPSARP-----------EHVVDEVLELFIELGADDDQLDFPVIYASALNGTSSLSDD----------------------------------------------------------------P---A----D--------------------------QE-PTMAPIFDTIIEKIPAPVD---------------NSDEPLQFQVSLLDYNDYVGRIGIGRVFRGTIKVGDQVALIKLDGT---------------VKKFRVTKLFGFFGLKRLEIQEAKAGDLIAVSGMEDIFV-GETVTPVDHQD------ALPILH-IDEPTLQMTFLVNNSPFAGREGKFVTARKIEERLMAELQTDVSLRVEPTNSPDAWTVSGRGELHLSILIENMRRE--GYELQVSRPEVIEKE--I-------------------------------------------------------------------------------DG---------------------------------------------------------VKCEPFERVQIDTPEEYMGSVIESLSLRKG-EMQDMVHTGN-GQIRLTFLTPARGLIGYSTEFLSMTRGYGIMNHTFDQ--YLPMLPGQIGGRHQGALVSIDTGKATTYSIMSIEERGTVFVEPGTEVYEGMIIGENSRDNDLTVNITKAKQMTNVRSATKDQTSVIKKPKQLTLEESLEFLNDDEYCEVTPESIRLRKQILEKNAREKASKKKK
5LJ3 Chain:C ((128-943))---------------NIPERIINVGVIGPLHSGKTSLMDLLVIDSHKRIPDMSKNVELGWKPLRYLDNLKQEIDRGLSIKLNGSTLLCTDLESKSRMINFLDAPGHVNFMDETAVALAASDLVLIVIDVVEGVTFVVEQLIKQSIKNNVAMCFVINKLDRLILDLKLPPMDAYLKLNHIIANINSFTKGNVFS--PIDNNIIFASTKLGFTFTIKEFVSYYYAHSIPSSKIDDFTTRLWGSVYYHKGNFRTKPFENVEKYPTFVEFILIPLYKIFSYALSMEKDKLKNLLRSNFRVNLSQEALQYDPQPFLKHVLQLIFRQQTGLVDAITRCYQ-PFELFDNKTAHLSIPGKSTPEGTLWAHVLKTVDY-GGAEWSLVRIYSGLLKRGDTVRILDTSQSESRQKRQLHDIEDDETPSCEVEEIGLLGGRYVYPVHEAHKGQIVLIKGISSAYIKSATLYSVKSKEDMKQLKFFKPLDYITEAVF----KIVLQPLLPRE--LP---KLLDALNKISKYYPGVIIKVE-ESGEHVILGNGELYMDCLLYDLRASYAKIEIKISDPLTVFSESCSNESFASIPVSNISVAAEPMDSKMIQDLSRPRKLSKILRTEYGWDSLASRNVWSFYNLINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPLAEEPIYGVQYKLLSISVPSDVNIDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAPLLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMCQLYFWHKIWRKVPGD-------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5LJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 2639 -18004 -6.82 -38.55
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : -6.82
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_5LJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LJ3-query.scw
PDB file : Tito_Scwrl_5LJ3.pdb: