Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLLQLQDVTYRYKNTAEAVLYQINYNFEPGKFYSIIGESGAGKSTLLSLLAGLDSPVEGSILFQGEDIRKKGYSYHRMHHISLVFQNYNLIDYLSPLENIQLVNKKASK----DTLLEL-----------GLDESQIKRNVLQLSGGQQQRVAIARSLVSEAPVILADEPTGNLDPKTAGDIVELLKSLAQKTGKCVIVVTHSKEVAQASDITLELKDKKLTETRNTSK
4MRS Chain:B ((360-580))--SVTFDNVVFGYDRD-REILHGLSFEVAAGSRVAIVGPSGAGKSTIARLLFRFYDPWEGRILIDGQDIAHVTQTSL-RAALGIVPQDSVLFND-TIGYNIAYGRDGASRAEVDAAAKGAAIADFIARLPQGYDT-EVGERGLKLSGGEKQRVAIARTLVKNPPILLFDEATSALDTRTEQDILSTMRAVA--SHRTTISIAHRLSTIADSDTILVLDQGRLAEQGSHL-


General information:
TITO was launched using:
RESULT:

Template: 4MRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1031 -72978 -70.78 -354.26
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -70.78
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4MRS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MRS-query.scw
PDB file : Tito_Scwrl_4MRS.pdb: