Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDWLDIAGKVVIVTGGSSGIGRSIVENLLKQNAQVANFDVTECRI-------QHENLLSLKVDVSSKTDIEEGIYKVMKHFKTIDGLVNNAGINIPSLLIDRNHPKSKYELSEQVFDKMIAVNQKSVYLMSQAVGRILVQK-GSGVIVNLSSESGLEGSEGQSCYAATKAAMNSFTRSWAKELGKRNVRVVGVAPGILEETGLRTQEYEEALSYTRGISVEQLRNGYSRTSTIPLGRSGKLQEVADLVCYYLSERSSYITGVTTNISGGKTRG
4Z9Y Chain:C ((5-252))---SFDLQGKVALITGCDTGLGQGMAIGLAQAGCDIVGVNIVEPKDTIEKVTALGRRFLSLTADMSNVSGHAELVEKAVAEFGHVDILVNNAGIIRRE---------DAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGKGGKIINIASMLSFQGGIRVPSYTASKSAVMGVTRLMANEWAKHGINVNAIAPGYMATNNT-----QQLRAD------EERSK--EILDRIPAGRWGLPQDLMGPSVFLASSASDYINGYTIAVDGGWLA-


General information:
TITO was launched using:
RESULT:

Template: 4Z9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1275 -21331 -16.73 -88.88
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain C : 0.74

3D Compatibility (PKB) : -16.73
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_4Z9Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Z9Y-query.scw
PDB file : Tito_Scwrl_4Z9Y.pdb: