Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRSQLTILTNICLIEDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPLDTGGRYIVICYKATEFSGTLQSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMMEAPDKSEFFYPRRTEDDWEKKIF
3MCF Chain:B ((28-88))--------------------------------DRW---IVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVF------EHRTYVYVLTVTEL-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3MCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 163 -19290 -118.34 -350.73
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : -118.34
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3MCF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MCF-query.scw
PDB file : Tito_Scwrl_3MCF.pdb: