Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQFRKTLNIGIMLKIVLSEIGMTQGLLAGKRFLTAGVASKLSIAYGIAQALHREGAELAFTYPNEKLKKRVDEFAEQFGS-----------KLVFPCDVAVDAEIDNAFAELAKHWDGVDGVVHSIGFAPAHT----LDGDFTDVTDRDGFKIAHDISAYSFVAMARAAKPLLQA--RQGCLLTLTYQGSERVMPNY--NVMGMAKASLEAGVRYLASSLGV-DGIRVNAISAGPIRTLAASGIKSFRKMLDANEKVAPLKRNVT----------IEEVGNAALFLCS-PWASGITGEILYVDAGFNTVGMSQSMMDDE---
1DFI Chain:A ((1-257))-----------------------G-FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAE----------DASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVT----REGFKIAHDISSYSFVAMAKACRSM---LNPGSALLTLSYLGAER-AIPNYN-VMGLAKASLEANVRYMAN-AMGPEGVRVNAISAGPIRTL--------------------MLAHCEAVTPIRRTVTIEDVGNSAAFLCSD-LSAGISGEVVHVDGGFSIAA---------MNE


General information:
TITO was launched using:
RESULT:

Template: 1DFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1031 -58991 -57.22 -276.95
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -57.22
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.599

(partial model without unconserved sides chains):
PDB file : Tito_1DFI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DFI-query.scw
PDB file : Tito_Scwrl_1DFI.pdb: