Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFTDGMVNILIGGKEIDDELLEEVEGQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDPNKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDASESARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLDGTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2J37 Chain:W ((8-488))------------------------RKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNI----------------------------KLVKQLRENVKSAIDLEEM-----------------ASGLNKRKMIQHAVFKELVKLVDPGVKAW---TPTKGNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQ------PDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQ


General information:
TITO was launched using:
RESULT:

Template: 2J37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain W - contact count / total energy / energy per contact / energy per residue : 1473 -134499 -91.31 -463.79
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain W : 0.67

3D Compatibility (PKB) : -91.31
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.576

(partial model without unconserved sides chains):
PDB file : Tito_2J37.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J37-query.scw
PDB file : Tito_Scwrl_2J37.pdb: