Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRYPILIHPNDKLKRTAQPIDVITDETIALLDNLYETMIANDGIGIAAPQVGQNKRIAVIEVDEGEKFELINPEIIEAKGES-LDVEGCLSIPHVYGTVKRADEVTVRYYDRDGEEIEVTAFGYLARAFQHEIDHLDGILFIEKMIQQIPEEELEEYMEEHLDD
1RL4 Chain:B ((10-172))---KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWN------RIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELI---


General information:
TITO was launched using:
RESULT:

Template: 1RL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 728 -30454 -41.83 -201.68
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -41.83
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_1RL4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RL4-query.scw
PDB file : Tito_Scwrl_1RL4.pdb: